Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkd1Q99MH6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkd1Q99MH6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd1Q99MH6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd1Q99MH6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd1Q99MH6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Gm11539-201ENSMUST00000119837 557 ntBASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Gm5417-201ENSMUST00000079706 384 ntBASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkd1Q99MH6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.24■□□□□ 0.03
Nkd1Q99MH6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms