Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Gm14822-201ENSMUST00000122247 291 ntBASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcd2Q99JR8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcd2Q99JR8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcd2Q99JR8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Gm5682-201ENSMUST00000173402 505 ntBASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcd2Q99JR8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcd2Q99JR8 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.27■□□□□ 0.19
Smarcd2Q99JR8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcd2Q99JR8 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.27■□□□□ 0.19
Smarcd2Q99JR8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms