Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha3Q91Y16 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdha3Q91Y16 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdha3Q91Y16 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdha3Q91Y16 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Gm27742-201ENSMUST00000184667 60 ntBASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha3Q91Y16 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha3Q91Y16 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms