Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha9Q91Y11 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Mir6404-201ENSMUST00000183699 94 ntBASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdha9Q91Y11 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Gm17807-201ENSMUST00000186869 298 ntBASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha9Q91Y11 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha9Q91Y11 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms