Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Gm23634-201ENSMUST00000175071 91 ntBASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb1Q91Y08 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Gm11950-201ENSMUST00000121615 838 ntBASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb1Q91Y08 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb1Q91Y08 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 AA414768-201ENSMUST00000121924 1257 ntBASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb1Q91Y08 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms