Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Gm15794-201ENSMUST00000120182 631 ntBASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb6Q91XZ4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb6Q91XZ4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Dancr-204ENSMUST00000132389 2347 ntBASIC16.61■□□□□ 0.25
Pcdhb6Q91XZ4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb6Q91XZ4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb6Q91XZ4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb6Q91XZ4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms