Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.49■□□□□ 0.55
Trex1Q91XB0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.49■□□□□ 0.55
Trex1Q91XB0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trex1Q91XB0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.48■□□□□ 0.55
Trex1Q91XB0 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.48■□□□□ 0.55
Trex1Q91XB0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trex1Q91XB0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.47■□□□□ 0.55
Trex1Q91XB0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trex1Q91XB0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trex1Q91XB0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trex1Q91XB0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.45■□□□□ 0.54
Trex1Q91XB0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Gm2213-201ENSMUST00000197485 688 ntBASIC18.45■□□□□ 0.54
Trex1Q91XB0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.45■□□□□ 0.54
Trex1Q91XB0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trex1Q91XB0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms