Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.62■□□□□ 0.25
Rprd1aQ8VDS4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rprd1aQ8VDS4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Rprl3-201ENSMUST00000157400 290 ntBASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rprd1aQ8VDS4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Dancr-204ENSMUST00000132389 2347 ntBASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rprd1aQ8VDS4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rprd1aQ8VDS4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rprd1aQ8VDS4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rprd1aQ8VDS4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms