Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top1mtQ8R4U6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top1mtQ8R4U6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Top1mtQ8R4U6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Top1mtQ8R4U6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Top1mtQ8R4U6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Top1mtQ8R4U6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms