Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Nup85Q8R480 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.62■□□□□ 0.25
Nup85Q8R480 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.62■□□□□ 0.25
Nup85Q8R480 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.62■□□□□ 0.25
Nup85Q8R480 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Dancr-204ENSMUST00000132389 2347 ntBASIC16.62■□□□□ 0.25
Nup85Q8R480 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nup85Q8R480 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.61■□□□□ 0.25
Nup85Q8R480 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Nup85Q8R480 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nup85Q8R480 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Gm18669-201ENSMUST00000216049 778 ntBASIC16.61■□□□□ 0.25
Nup85Q8R480 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.61■□□□□ 0.25
Nup85Q8R480 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Nup85Q8R480 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nup85Q8R480 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nup85Q8R480 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Nup85Q8R480 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Nup85Q8R480 Gm27742-201ENSMUST00000184667 60 ntBASIC16.6■□□□□ 0.25
Nup85Q8R480 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.6■□□□□ 0.25
Nup85Q8R480 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nup85Q8R480 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nup85Q8R480 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nup85Q8R480 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.59■□□□□ 0.25
Nup85Q8R480 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Gm27357-201ENSMUST00000183754 135 ntBASIC16.59■□□□□ 0.25
Nup85Q8R480 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.59■□□□□ 0.25
Nup85Q8R480 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Nup85Q8R480 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.59■□□□□ 0.25
Nup85Q8R480 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nup85Q8R480 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup85Q8R480 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.58■□□□□ 0.25
Nup85Q8R480 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Nup85Q8R480 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup85Q8R480 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nup85Q8R480 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nup85Q8R480 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.58■□□□□ 0.24
Nup85Q8R480 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nup85Q8R480 Mir3081-201ENSMUST00000175305 84 ntBASIC16.58■□□□□ 0.24
Nup85Q8R480 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nup85Q8R480 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms