Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.33■□□□□ 0.37
Nup58Q8R332 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup58Q8R332 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.33■□□□□ 0.36
Nup58Q8R332 Gm45058-201ENSMUST00000205810 766 ntBASIC17.33■□□□□ 0.36
Nup58Q8R332 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.33■□□□□ 0.36
Nup58Q8R332 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Nup58Q8R332 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup58Q8R332 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Gm18115-201ENSMUST00000221209 621 ntBASIC17.32■□□□□ 0.36
Nup58Q8R332 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
Nup58Q8R332 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup58Q8R332 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nup58Q8R332 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nup58Q8R332 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nup58Q8R332 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Nup58Q8R332 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.31■□□□□ 0.36
Nup58Q8R332 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup58Q8R332 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Mir5130-201ENSMUST00000175160 84 ntBASIC17.3■□□□□ 0.36
Nup58Q8R332 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nup58Q8R332 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup58Q8R332 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup58Q8R332 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup58Q8R332 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup58Q8R332 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms