Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Gm27702-201ENSMUST00000184512 56 ntBASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp7Q8R1T1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Gm14494-201ENSMUST00000118786 435 ntBASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp7Q8R1T1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm8825-201ENSMUST00000182565 998 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm4518-201ENSMUST00000182638 718 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.62■□□□□ 0.89
Chmp7Q8R1T1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Gm27646-201ENSMUST00000183989 110 ntBASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp7Q8R1T1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Gm6736-201ENSMUST00000166583 948 ntBASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp7Q8R1T1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms