Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Zcchc9Q8R1J3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Mir5131-201ENSMUST00000175426 93 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44454-201ENSMUST00000198541 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Zcchc9Q8R1J3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Zcchc9Q8R1J3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zcchc9Q8R1J3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Zcchc9Q8R1J3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Zcchc9Q8R1J3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zcchc9Q8R1J3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Zcchc9Q8R1J3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Zcchc9Q8R1J3 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Gm25925-201ENSMUST00000158314 306 ntBASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Zcchc9Q8R1J3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms