Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sf3a1Q8K4Z5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a1Q8K4Z5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a1Q8K4Z5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a1Q8K4Z5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a1Q8K4Z5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a1Q8K4Z5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a1Q8K4Z5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a1Q8K4Z5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Mir3081-201ENSMUST00000175305 84 ntBASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sf3a1Q8K4Z5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm13312-201ENSMUST00000119631 718 ntBASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm17807-201ENSMUST00000186869 298 ntBASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a1Q8K4Z5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Sf3a1Q8K4Z5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms