Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Ebf4Q8K4J2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ebf4Q8K4J2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm10517-202ENSMUST00000192970 758 ntBASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ebf4Q8K4J2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Gm13148-201ENSMUST00000118892 745 ntBASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ebf4Q8K4J2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
Ebf4Q8K4J2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Gm26571-201ENSMUST00000181399 666 ntBASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Gm42545-201ENSMUST00000202755 922 ntBASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Ebf4Q8K4J2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms