Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc4Q8CG47 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Gm7862-201ENSMUST00000121461 292 ntBASIC19.87■□□□□ 0.77
Smc4Q8CG47 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Gm18733-201ENSMUST00000173950 856 ntBASIC19.87■□□□□ 0.77
Smc4Q8CG47 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc4Q8CG47 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44357-201ENSMUST00000195897 142 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm19658-201ENSMUST00000196231 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44367-201ENSMUST00000196836 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44350-201ENSMUST00000197197 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44390-201ENSMUST00000197533 144 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44313-201ENSMUST00000198018 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44486-201ENSMUST00000198508 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44314-201ENSMUST00000199263 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44394-201ENSMUST00000199558 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44484-201ENSMUST00000199873 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44466-201ENSMUST00000200264 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm44359-201ENSMUST00000200671 138 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.86■□□□□ 0.77
Smc4Q8CG47 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc4Q8CG47 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.85■□□□□ 0.77
Smc4Q8CG47 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.85■□□□□ 0.77
Smc4Q8CG47 Gm8655-201ENSMUST00000221159 852 ntBASIC19.85■□□□□ 0.77
Smc4Q8CG47 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc4Q8CG47 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Gm4459-201ENSMUST00000118750 468 ntBASIC19.84■□□□□ 0.77
Smc4Q8CG47 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc4Q8CG47 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Gm4535-201ENSMUST00000182274 558 ntBASIC19.83■□□□□ 0.77
Smc4Q8CG47 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc4Q8CG47 Gm10355-201ENSMUST00000097146 517 ntBASIC19.83■□□□□ 0.77
Smc4Q8CG47 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc4Q8CG47 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms