Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Zswim3Q8CFL8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Zswim3Q8CFL8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Zswim3Q8CFL8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zswim3Q8CFL8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Zswim3Q8CFL8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Gm8825-201ENSMUST00000182565 998 ntBASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Mir6404-201ENSMUST00000183699 94 ntBASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zswim3Q8CFL8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms