Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Gm27742-201ENSMUST00000184667 60 ntBASIC19.08■□□□□ 0.64
Nup88Q8CEC0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup88Q8CEC0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.07■□□□□ 0.64
Nup88Q8CEC0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Gm6623-201ENSMUST00000173570 544 ntBASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup88Q8CEC0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Gm45328-201ENSMUST00000210942 917 ntBASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup88Q8CEC0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Nup88Q8CEC0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup88Q8CEC0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup88Q8CEC0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup88Q8CEC0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup88Q8CEC0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup88Q8CEC0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms