Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Usp43Q8BUM9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Usp43Q8BUM9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Usp43Q8BUM9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp43Q8BUM9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp43Q8BUM9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms