Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim65Q8BFW4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.34■□□□□ 0.37
Trim65Q8BFW4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim65Q8BFW4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim65Q8BFW4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim65Q8BFW4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim65Q8BFW4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim65Q8BFW4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms