Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank2Q80Z38 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank2Q80Z38 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Shank2Q80Z38 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Shank2Q80Z38 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Thap2-203ENSMUST00000218989 527 ntBASIC20.76■□□□□ 0.91
Shank2Q80Z38 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shank2Q80Z38 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gm43767-201ENSMUST00000198933 381 ntBASIC20.75■□□□□ 0.91
Shank2Q80Z38 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shank2Q80Z38 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.74■□□□□ 0.91
Shank2Q80Z38 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shank2Q80Z38 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.74■□□□□ 0.91
Shank2Q80Z38 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC20.73■□□□□ 0.91
Shank2Q80Z38 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.73■□□□□ 0.91
Shank2Q80Z38 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.73■□□□□ 0.91
Shank2Q80Z38 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.73■□□□□ 0.91
Shank2Q80Z38 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shank2Q80Z38 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Rpph1-201ENSMUST00000175096 319 ntBASIC20.72■□□□□ 0.91
Shank2Q80Z38 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC20.72■□□□□ 0.91
Shank2Q80Z38 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.72■□□□□ 0.91
Shank2Q80Z38 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank2Q80Z38 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.71■□□□□ 0.91
Shank2Q80Z38 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank2Q80Z38 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shank2Q80Z38 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Shank2Q80Z38 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank2Q80Z38 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms