Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp6nlQ80XC3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp6nlQ80XC3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Gm24513-201ENSMUST00000174964 138 ntBASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Usp6nlQ80XC3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Gm27397-201ENSMUST00000184997 107 ntBASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Gm10175-201ENSMUST00000086013 645 ntBASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Usp6nlQ80XC3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Gm18622-201ENSMUST00000219361 595 ntBASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp6nlQ80XC3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Gm25911-201ENSMUST00000157621 56 ntBASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Gm27646-201ENSMUST00000183989 110 ntBASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp6nlQ80XC3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp6nlQ80XC3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp6nlQ80XC3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp6nlQ80XC3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms