Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp38Q80UU2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rpp38Q80UU2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rpp38Q80UU2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.14■□□□□ 0.18
Rpp38Q80UU2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Rpp38Q80UU2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.14■□□□□ 0.17
Rpp38Q80UU2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Mir3081-201ENSMUST00000175305 84 ntBASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rpp38Q80UU2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.12■□□□□ 0.17
Rpp38Q80UU2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpp38Q80UU2 Gm7284-201ENSMUST00000131667 944 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms