Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Gm11594-201ENSMUST00000122313 162 ntBASIC17.65■□□□□ 0.42
Ush1gQ80T11 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Mir5126-201ENSMUST00000175513 77 ntBASIC17.65■□□□□ 0.42
Ush1gQ80T11 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1gQ80T11 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.64■□□□□ 0.42
Ush1gQ80T11 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ush1gQ80T11 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.64■□□□□ 0.41
Ush1gQ80T11 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1gQ80T11 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ush1gQ80T11 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ush1gQ80T11 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.61■□□□□ 0.41
Ush1gQ80T11 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ush1gQ80T11 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms