Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ShprhQ7TPQ3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Gm18246-201ENSMUST00000221023 728 ntBASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
ShprhQ7TPQ3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Gm17271-201ENSMUST00000165535 355 ntBASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Gm43294-201ENSMUST00000202850 2490 ntBASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Thap2-203ENSMUST00000218989 527 ntBASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ShprhQ7TPQ3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Gm11025-201ENSMUST00000140773 466 ntBASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Gm27321-201ENSMUST00000185021 205 ntBASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ShprhQ7TPQ3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShprhQ7TPQ3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Gm13127-201ENSMUST00000118978 1389 ntBASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ShprhQ7TPQ3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
ShprhQ7TPQ3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ShprhQ7TPQ3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms