Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sned1Q70E20 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Gm13223-201ENSMUST00000118609 747 ntBASIC19.45■□□□□ 0.7
Sned1Q70E20 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.45■□□□□ 0.7
Sned1Q70E20 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sned1Q70E20 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.45■□□□□ 0.7
Sned1Q70E20 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.45■□□□□ 0.7
Sned1Q70E20 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sned1Q70E20 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sned1Q70E20 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sned1Q70E20 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.44■□□□□ 0.7
Sned1Q70E20 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sned1Q70E20 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.44■□□□□ 0.7
Sned1Q70E20 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.44■□□□□ 0.7
Sned1Q70E20 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Sned1Q70E20 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.44■□□□□ 0.7
Sned1Q70E20 Gm18246-201ENSMUST00000221023 728 ntBASIC19.44■□□□□ 0.7
Sned1Q70E20 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sned1Q70E20 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.44■□□□□ 0.7
Sned1Q70E20 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sned1Q70E20 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.44■□□□□ 0.7
Sned1Q70E20 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sned1Q70E20 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Gm25287-201ENSMUST00000103846 110 ntBASIC19.43■□□□□ 0.7
Sned1Q70E20 Gm22918-201ENSMUST00000103855 110 ntBASIC19.43■□□□□ 0.7
Sned1Q70E20 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.43■□□□□ 0.7
Sned1Q70E20 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sned1Q70E20 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sned1Q70E20 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sned1Q70E20 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sned1Q70E20 Gm9385-201ENSMUST00000117563 472 ntBASIC19.42■□□□□ 0.7
Sned1Q70E20 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Gm19164-201ENSMUST00000210667 640 ntBASIC19.42■□□□□ 0.7
Sned1Q70E20 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sned1Q70E20 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.42■□□□□ 0.7
Sned1Q70E20 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Gm12151-201ENSMUST00000121374 290 ntBASIC19.42■□□□□ 0.7
Sned1Q70E20 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.42■□□□□ 0.7
Sned1Q70E20 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.42■□□□□ 0.7
Sned1Q70E20 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.42■□□□□ 0.7
Sned1Q70E20 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sned1Q70E20 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.41■□□□□ 0.7
Sned1Q70E20 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.41■□□□□ 0.7
Sned1Q70E20 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sned1Q70E20 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Gm16198-201ENSMUST00000118766 670 ntBASIC19.41■□□□□ 0.7
Sned1Q70E20 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.41■□□□□ 0.7
Sned1Q70E20 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.41■□□□□ 0.7
Sned1Q70E20 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.41■□□□□ 0.7
Sned1Q70E20 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sned1Q70E20 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sned1Q70E20 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.4■□□□□ 0.7
Sned1Q70E20 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms