Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Casc1Q6TDU8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Casc1Q6TDU8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Casc1Q6TDU8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Casc1Q6TDU8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Casc1Q6TDU8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc1Q6TDU8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Gm21559-201ENSMUST00000220638 855 ntBASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Gm8587-201ENSMUST00000076538 843 ntBASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc1Q6TDU8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Gm27389-201ENSMUST00000183622 195 ntBASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Casc1Q6TDU8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Gm23634-201ENSMUST00000175071 91 ntBASIC19.29■□□□□ 0.68
Casc1Q6TDU8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Casc1Q6TDU8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms