Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scn10aQ6QIY3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Gm12008-201ENSMUST00000117791 755 ntBASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Gm18889-201ENSMUST00000174284 929 ntBASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn10aQ6QIY3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm22065-201ENSMUST00000103753 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm22066-201ENSMUST00000103761 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24932-201ENSMUST00000103763 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24115-201ENSMUST00000103799 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm22190-201ENSMUST00000103827 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm22191-201ENSMUST00000103831 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24721-201ENSMUST00000103849 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm28018-201ENSMUST00000103869 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm26399-201ENSMUST00000103937 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm25349-201ENSMUST00000177728 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm23616-201ENSMUST00000177797 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm25871-201ENSMUST00000177816 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24752-201ENSMUST00000178240 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24496-201ENSMUST00000178287 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm25649-201ENSMUST00000178476 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm25548-201ENSMUST00000178681 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm23147-201ENSMUST00000178841 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm26095-201ENSMUST00000179270 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm22171-201ENSMUST00000179283 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm23936-201ENSMUST00000179354 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm22619-201ENSMUST00000179516 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm25255-201ENSMUST00000179579 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24755-201ENSMUST00000179691 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm26506-201ENSMUST00000179692 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm25086-201ENSMUST00000179931 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm23243-201ENSMUST00000180047 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24659-201ENSMUST00000180212 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm24169-201ENSMUST00000180244 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm23689-201ENSMUST00000180354 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm27359-201ENSMUST00000184153 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm27785-201ENSMUST00000184268 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm27466-201ENSMUST00000184396 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gm27703-201ENSMUST00000184836 110 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn10aQ6QIY3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Gm23547-201ENSMUST00000158210 271 ntBASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Gm27622-201ENSMUST00000183779 60 ntBASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Scn10aQ6QIY3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Scn10aQ6QIY3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms