Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gm14822-201ENSMUST00000122247 291 ntBASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gm4899-201ENSMUST00000178708 719 ntBASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Mir8117-201ENSMUST00000184773 107 ntBASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gm19164-201ENSMUST00000210667 640 ntBASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nup98Q6PFD9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Gm23935-201ENSMUST00000102303 57 ntBASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Gm24270-201ENSMUST00000102326 57 ntBASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Gm24245-201ENSMUST00000157318 57 ntBASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.92■□□□□ 0.62
Nup98Q6PFD9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup98Q6PFD9 Gm17968-201ENSMUST00000194902 784 ntBASIC18.9■□□□□ 0.62
Nup98Q6PFD9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Gm24513-201ENSMUST00000174964 138 ntBASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nup98Q6PFD9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nup98Q6PFD9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nup98Q6PFD9 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.89■□□□□ 0.62
Nup98Q6PFD9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms