Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcc2Q6PDG5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcc2Q6PDG5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcc2Q6PDG5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Ank2-226ENSMUST00000189368 339 ntBASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarcc2Q6PDG5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcc2Q6PDG5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc2Q6PDG5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc2Q6PDG5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.83■□□□□ 0.61
Smarcc2Q6PDG5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc2Q6PDG5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc2Q6PDG5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcc2Q6PDG5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcc2Q6PDG5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcc2Q6PDG5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms