Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Gm44430-201ENSMUST00000203376 995 ntBASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Gm10819-201ENSMUST00000099988 561 ntBASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp49Q6P9L4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Gm21362-201ENSMUST00000194272 928 ntBASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp49Q6P9L4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Gm10052-201ENSMUST00000168019 960 ntBASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Gm17808-201ENSMUST00000200859 894 ntBASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Gm7729-201ENSMUST00000050143 801 ntBASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp49Q6P9L4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp49Q6P9L4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp49Q6P9L4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp49Q6P9L4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp49Q6P9L4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Usp49Q6P9L4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp49Q6P9L4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp49Q6P9L4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp49Q6P9L4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp49Q6P9L4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Usp49Q6P9L4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp49Q6P9L4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp49Q6P9L4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms