Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtl3Q6P1Y1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtl3Q6P1Y1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Gm13312-201ENSMUST00000119631 718 ntBASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rtl3Q6P1Y1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtl3Q6P1Y1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtl3Q6P1Y1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms