Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.95■□□□□ 0.3
Scube3Q66PY1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.95■□□□□ 0.3
Scube3Q66PY1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.95■□□□□ 0.3
Scube3Q66PY1 Gm44454-201ENSMUST00000198541 138 ntBASIC16.95■□□□□ 0.3
Scube3Q66PY1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scube3Q66PY1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.94■□□□□ 0.3
Scube3Q66PY1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scube3Q66PY1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.93■□□□□ 0.3
Scube3Q66PY1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Gm43371-201ENSMUST00000202838 1031 ntBASIC16.93■□□□□ 0.3
Scube3Q66PY1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scube3Q66PY1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Gm15372-201ENSMUST00000120729 834 ntBASIC16.92■□□□□ 0.3
Scube3Q66PY1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.92■□□□□ 0.3
Scube3Q66PY1 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.92■□□□□ 0.3
Scube3Q66PY1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Scube3Q66PY1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Scube3Q66PY1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms