Protein–RNA interactions for Protein: Q61644

Pacsin1, Protein kinase C and casein kinase substrate in neurons protein 1, mousemouse

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacsin1Q61644 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pacsin1Q61644 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pacsin1Q61644 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pacsin1Q61644 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Gm11355-201ENSMUST00000121120 306 ntBASIC17.36■□□□□ 0.37
Pacsin1Q61644 Gm23634-201ENSMUST00000175071 91 ntBASIC17.36■□□□□ 0.37
Pacsin1Q61644 Gm18421-201ENSMUST00000204122 625 ntBASIC17.36■□□□□ 0.37
Pacsin1Q61644 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pacsin1Q61644 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Gm11336-201ENSMUST00000118168 334 ntBASIC17.35■□□□□ 0.37
Pacsin1Q61644 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pacsin1Q61644 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.35■□□□□ 0.37
Pacsin1Q61644 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pacsin1Q61644 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.34■□□□□ 0.37
Pacsin1Q61644 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Gm37722-201ENSMUST00000193757 208 ntBASIC17.34■□□□□ 0.37
Pacsin1Q61644 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.34■□□□□ 0.37
Pacsin1Q61644 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pacsin1Q61644 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms