Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ift88Q61371 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ift88Q61371 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ift88Q61371 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.92■□□□□ 0.46
Ift88Q61371 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
Ift88Q61371 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ift88Q61371 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Ift88Q61371 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ift88Q61371 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.91■□□□□ 0.46
Ift88Q61371 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.91■□□□□ 0.46
Ift88Q61371 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.91■□□□□ 0.46
Ift88Q61371 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ift88Q61371 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ift88Q61371 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.91■□□□□ 0.46
Ift88Q61371 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ift88Q61371 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.91■□□□□ 0.46
Ift88Q61371 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ift88Q61371 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ift88Q61371 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.9■□□□□ 0.46
Ift88Q61371 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.9■□□□□ 0.46
Ift88Q61371 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ift88Q61371 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.9■□□□□ 0.46
Ift88Q61371 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Ift88Q61371 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.9■□□□□ 0.46
Ift88Q61371 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ift88Q61371 Gm11336-201ENSMUST00000118168 334 ntBASIC17.9■□□□□ 0.46
Ift88Q61371 Gm13474-201ENSMUST00000122466 815 ntBASIC17.9■□□□□ 0.46
Ift88Q61371 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ift88Q61371 Gm2274-201ENSMUST00000184539 609 ntBASIC17.9■□□□□ 0.46
Ift88Q61371 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Gm5417-201ENSMUST00000079706 384 ntBASIC17.9■□□□□ 0.46
Ift88Q61371 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ift88Q61371 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ift88Q61371 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ift88Q61371 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Gm16061-201ENSMUST00000122167 857 ntBASIC17.89■□□□□ 0.45
Ift88Q61371 Gm22240-201ENSMUST00000175225 82 ntBASIC17.89■□□□□ 0.45
Ift88Q61371 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.89■□□□□ 0.45
Ift88Q61371 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.89■□□□□ 0.45
Ift88Q61371 Gm29707-201ENSMUST00000196325 491 ntBASIC17.89■□□□□ 0.45
Ift88Q61371 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.89■□□□□ 0.45
Ift88Q61371 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.89■□□□□ 0.45
Ift88Q61371 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ift88Q61371 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms