Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scnn1aQ61180 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scnn1aQ61180 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Scnn1aQ61180 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scnn1aQ61180 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Gm27525-201ENSMUST00000184465 107 ntBASIC18.54■□□□□ 0.56
Scnn1aQ61180 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.54■□□□□ 0.56
Scnn1aQ61180 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scnn1aQ61180 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scnn1aQ61180 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scnn1aQ61180 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scnn1aQ61180 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scnn1aQ61180 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scnn1aQ61180 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scnn1aQ61180 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Gm27646-201ENSMUST00000183989 110 ntBASIC18.51■□□□□ 0.55
Scnn1aQ61180 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.51■□□□□ 0.55
Scnn1aQ61180 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.51■□□□□ 0.55
Scnn1aQ61180 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scnn1aQ61180 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scnn1aQ61180 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.49■□□□□ 0.55
Scnn1aQ61180 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.49■□□□□ 0.55
Scnn1aQ61180 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.49■□□□□ 0.55
Scnn1aQ61180 Gm6257-201ENSMUST00000163864 910 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms