Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sdf4Q61112 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdf4Q61112 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.4■□□□□ 0.22
Sdf4Q61112 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Sdf4Q61112 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sdf4Q61112 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sdf4Q61112 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Sdf4Q61112 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sdf4Q61112 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.39■□□□□ 0.21
Sdf4Q61112 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdf4Q61112 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sdf4Q61112 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sdf4Q61112 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Sdf4Q61112 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Sdf4Q61112 Gm7977-201ENSMUST00000193787 748 ntBASIC16.38■□□□□ 0.21
Sdf4Q61112 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Sdf4Q61112 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdf4Q61112 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sdf4Q61112 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sdf4Q61112 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.37■□□□□ 0.21
Sdf4Q61112 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.37■□□□□ 0.21
Sdf4Q61112 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sdf4Q61112 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sdf4Q61112 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.37■□□□□ 0.21
Sdf4Q61112 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdf4Q61112 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms