Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav8d-1Q5R1H8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav8d-1Q5R1H8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav8d-1Q5R1H8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Gm715-201ENSMUST00000117865 831 ntBASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8d-1Q5R1H8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav8d-1Q5R1H8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms