Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav5d-4Q5R1F6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav5d-4Q5R1F6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Gm37722-201ENSMUST00000193757 208 ntBASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Dancr-204ENSMUST00000132389 2347 ntBASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav5d-4Q5R1F6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav5d-4Q5R1F6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav5d-4Q5R1F6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms