Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm43183-201ENSMUST00000200632 547 ntBASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Sybu-209ENSMUST00000228639 4113 ntBASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.6□□□□□ -0.39
Trav15-1-dv6-1Q5R1D2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms