Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.04■□□□□ 0.96
Mdc1Q5PSV9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mdc1Q5PSV9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 AC159295.1-201ENSMUST00000225326 940 ntBASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mdc1Q5PSV9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Mdc1Q5PSV9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Mdc1Q5PSV9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Mdc1Q5PSV9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gm4913-201ENSMUST00000117075 1290 ntBASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gm4899-201ENSMUST00000178708 719 ntBASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gm13127-201ENSMUST00000118978 1389 ntBASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Gm15500-202ENSMUST00000071641 1019 ntBASIC21.01■□□□□ 0.95
Mdc1Q5PSV9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21■□□□□ 0.95
Mdc1Q5PSV9 AC174742.1-201ENSMUST00000218272 304 ntBASIC21■□□□□ 0.95
Mdc1Q5PSV9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21■□□□□ 0.95
Mdc1Q5PSV9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Mdc1Q5PSV9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Gm17968-201ENSMUST00000194902 784 ntBASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mdc1Q5PSV9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Gm15358-201ENSMUST00000119249 520 ntBASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mdc1Q5PSV9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms