Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ckap2Q3V1H1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Gm15372-201ENSMUST00000120729 834 ntBASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Gm44454-201ENSMUST00000198541 138 ntBASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ckap2Q3V1H1 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ckap2Q3V1H1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Ank2-226ENSMUST00000189368 339 ntBASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ckap2Q3V1H1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ckap2Q3V1H1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ckap2Q3V1H1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.52■□□□□ 0.55
Ckap2Q3V1H1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ckap2Q3V1H1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ckap2Q3V1H1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ckap2Q3V1H1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Gm25406-201ENSMUST00000157599 105 ntBASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Gm17807-201ENSMUST00000186869 298 ntBASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ckap2Q3V1H1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ckap2Q3V1H1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ckap2Q3V1H1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ckap2Q3V1H1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms