Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrfip1Q3UZ39 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrfip1Q3UZ39 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrfip1Q3UZ39 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrfip1Q3UZ39 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrfip1Q3UZ39 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Gm18669-201ENSMUST00000216049 778 ntBASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrfip1Q3UZ39 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Lrrfip1Q3UZ39 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrfip1Q3UZ39 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrfip1Q3UZ39 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrrfip1Q3UZ39 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms