Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkl5Q3UTQ8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Gm45328-201ENSMUST00000210942 917 ntBASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl5Q3UTQ8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Gm17808-201ENSMUST00000200859 894 ntBASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl5Q3UTQ8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Gm29518-201ENSMUST00000190858 372 ntBASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl5Q3UTQ8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.71■□□□□ 0.59
Cdkl5Q3UTQ8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cdkl5Q3UTQ8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms