Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Gm3375-201ENSMUST00000203929 796 ntBASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Gm9731-201ENSMUST00000209480 747 ntBASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ptchd3Q0EEE2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.64■□□□□ 0.1
Ptchd3Q0EEE2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Odf3b-204ENSMUST00000227834 930 ntBASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ptchd3Q0EEE2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Gm5417-201ENSMUST00000079706 384 ntBASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.63■□□□□ 0.09
Ptchd3Q0EEE2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Gm21814-202ENSMUST00000203277 873 ntBASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.62■□□□□ 0.09
Ptchd3Q0EEE2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms