Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.39□□□□□ -0.11
H3f3aP84244 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
H3f3aP84244 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H3f3aP84244 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H3f3aP84244 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
H3f3aP84244 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
H3f3aP84244 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
H3f3aP84244 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
H3f3aP84244 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.38□□□□□ -0.11
H3f3aP84244 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
H3f3aP84244 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
H3f3aP84244 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H3f3aP84244 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
H3f3aP84244 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.37□□□□□ -0.11
H3f3aP84244 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
H3f3aP84244 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.37□□□□□ -0.11
H3f3aP84244 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.37□□□□□ -0.11
H3f3aP84244 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
H3f3aP84244 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.37□□□□□ -0.11
H3f3aP84244 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.36□□□□□ -0.11
H3f3aP84244 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
H3f3aP84244 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
H3f3aP84244 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H3f3aP84244 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.36□□□□□ -0.11
H3f3aP84244 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.36□□□□□ -0.11
H3f3aP84244 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Gm21362-201ENSMUST00000194272 928 ntBASIC14.36□□□□□ -0.11
H3f3aP84244 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.36□□□□□ -0.11
H3f3aP84244 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H3f3aP84244 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H3f3aP84244 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.36□□□□□ -0.11
H3f3aP84244 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.36□□□□□ -0.11
H3f3aP84244 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H3f3aP84244 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3aP84244 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H3f3aP84244 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H3f3aP84244 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3aP84244 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms