Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm3P62311 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm3P62311 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm3P62311 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Lsm3P62311 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Lsm3P62311 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Lsm3P62311 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.83□□□□□ -0.04
Lsm3P62311 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Lsm3P62311 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Lsm3P62311 Gm7291-201ENSMUST00000199147 382 ntBASIC14.83□□□□□ -0.04
Lsm3P62311 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.83□□□□□ -0.04
Lsm3P62311 Gm7514-201ENSMUST00000209475 934 ntBASIC14.83□□□□□ -0.04
Lsm3P62311 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Lsm3P62311 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.83□□□□□ -0.04
Lsm3P62311 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Lsm3P62311 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Lsm3P62311 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.83□□□□□ -0.04
Lsm3P62311 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm3P62311 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm3P62311 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Lsm3P62311 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm3P62311 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lsm3P62311 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm3P62311 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.82□□□□□ -0.04
Lsm3P62311 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.82□□□□□ -0.04
Lsm3P62311 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm3P62311 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm3P62311 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm3P62311 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.81□□□□□ -0.04
Lsm3P62311 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.81□□□□□ -0.04
Lsm3P62311 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.81□□□□□ -0.04
Lsm3P62311 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.81□□□□□ -0.04
Lsm3P62311 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm3P62311 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm3P62311 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.8□□□□□ -0.04
Lsm3P62311 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.8□□□□□ -0.04
Lsm3P62311 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Lsm3P62311 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Lsm3P62311 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Lsm3P62311 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.8□□□□□ -0.04
Lsm3P62311 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.8□□□□□ -0.04
Lsm3P62311 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm3P62311 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms