Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps33bP59016 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Vps33bP59016 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps33bP59016 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps33bP59016 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps33bP59016 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps33bP59016 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps33bP59016 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps33bP59016 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.33■□□□□ 0.85
Vps33bP59016 Rpph1-201ENSMUST00000175096 319 ntBASIC20.33■□□□□ 0.85
Vps33bP59016 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Vps33bP59016 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps33bP59016 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps33bP59016 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps33bP59016 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.33■□□□□ 0.84
Vps33bP59016 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vps33bP59016 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vps33bP59016 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Vps33bP59016 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.32■□□□□ 0.84
Vps33bP59016 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.32■□□□□ 0.84
Vps33bP59016 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.32■□□□□ 0.84
Vps33bP59016 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.32■□□□□ 0.84
Vps33bP59016 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.32■□□□□ 0.84
Vps33bP59016 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.32■□□□□ 0.84
Vps33bP59016 Gm27430-201ENSMUST00000184585 107 ntBASIC20.32■□□□□ 0.84
Vps33bP59016 Gm44333-201ENSMUST00000197168 107 ntBASIC20.32■□□□□ 0.84
Vps33bP59016 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.32■□□□□ 0.84
Vps33bP59016 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.32■□□□□ 0.84
Vps33bP59016 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vps33bP59016 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vps33bP59016 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps33bP59016 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Gm22065-201ENSMUST00000103753 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm22066-201ENSMUST00000103761 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24932-201ENSMUST00000103763 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24115-201ENSMUST00000103799 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm22190-201ENSMUST00000103827 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm22191-201ENSMUST00000103831 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24721-201ENSMUST00000103849 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm28018-201ENSMUST00000103869 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm26399-201ENSMUST00000103937 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.31■□□□□ 0.84
Vps33bP59016 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Vps33bP59016 Gm25349-201ENSMUST00000177728 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm23616-201ENSMUST00000177797 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm25871-201ENSMUST00000177816 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24752-201ENSMUST00000178240 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24496-201ENSMUST00000178287 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm25649-201ENSMUST00000178476 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm25548-201ENSMUST00000178681 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm23147-201ENSMUST00000178841 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm26095-201ENSMUST00000179270 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm22171-201ENSMUST00000179283 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm23936-201ENSMUST00000179354 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm22619-201ENSMUST00000179516 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm25255-201ENSMUST00000179579 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24755-201ENSMUST00000179691 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm26506-201ENSMUST00000179692 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm25086-201ENSMUST00000179931 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm23243-201ENSMUST00000180047 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24659-201ENSMUST00000180212 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm24169-201ENSMUST00000180244 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm23689-201ENSMUST00000180354 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Gm27359-201ENSMUST00000184153 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm27785-201ENSMUST00000184268 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm27466-201ENSMUST00000184396 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm27703-201ENSMUST00000184836 110 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.31■□□□□ 0.84
Vps33bP59016 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.31■□□□□ 0.84
Vps33bP59016 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps33bP59016 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Vps33bP59016 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps33bP59016 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Vps33bP59016 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps33bP59016 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms