Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.81■□□□□ 0.6
Cacnb3P54285 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.81■□□□□ 0.6
Cacnb3P54285 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.81■□□□□ 0.6
Cacnb3P54285 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cacnb3P54285 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacnb3P54285 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Gm5682-201ENSMUST00000173402 505 ntBASIC18.8■□□□□ 0.6
Cacnb3P54285 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cacnb3P54285 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacnb3P54285 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacnb3P54285 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.79■□□□□ 0.6
Cacnb3P54285 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.79■□□□□ 0.6
Cacnb3P54285 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacnb3P54285 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.78■□□□□ 0.6
Cacnb3P54285 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Cacnb3P54285 Gm25911-201ENSMUST00000157621 56 ntBASIC18.78■□□□□ 0.6
Cacnb3P54285 Gm24513-201ENSMUST00000174964 138 ntBASIC18.78■□□□□ 0.6
Cacnb3P54285 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.78■□□□□ 0.6
Cacnb3P54285 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacnb3P54285 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cacnb3P54285 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cacnb3P54285 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacnb3P54285 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.77■□□□□ 0.6
Cacnb3P54285 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms