Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh6P54276 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Msh6P54276 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.4■□□□□ 0.86
Msh6P54276 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.4■□□□□ 0.86
Msh6P54276 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.4■□□□□ 0.86
Msh6P54276 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh6P54276 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Msh6P54276 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.39■□□□□ 0.86
Msh6P54276 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Msh6P54276 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Msh6P54276 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.39■□□□□ 0.85
Msh6P54276 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.39■□□□□ 0.85
Msh6P54276 Mir3113-201ENSMUST00000175478 76 ntBASIC20.39■□□□□ 0.85
Msh6P54276 Mir8117-201ENSMUST00000184773 107 ntBASIC20.39■□□□□ 0.85
Msh6P54276 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.39■□□□□ 0.85
Msh6P54276 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Msh6P54276 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh6P54276 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Msh6P54276 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.38■□□□□ 0.85
Msh6P54276 Gm11764-201ENSMUST00000120221 623 ntBASIC20.38■□□□□ 0.85
Msh6P54276 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.38■□□□□ 0.85
Msh6P54276 Gm26308-201ENSMUST00000157768 69 ntBASIC20.38■□□□□ 0.85
Msh6P54276 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.38■□□□□ 0.85
Msh6P54276 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.38■□□□□ 0.85
Msh6P54276 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.38■□□□□ 0.85
Msh6P54276 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh6P54276 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Msh6P54276 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.37■□□□□ 0.85
Msh6P54276 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.37■□□□□ 0.85
Msh6P54276 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.37■□□□□ 0.85
Msh6P54276 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.37■□□□□ 0.85
Msh6P54276 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh6P54276 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.37■□□□□ 0.85
Msh6P54276 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Msh6P54276 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.36■□□□□ 0.85
Msh6P54276 Gm10576-201ENSMUST00000191927 825 ntBASIC20.36■□□□□ 0.85
Msh6P54276 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh6P54276 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh6P54276 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Msh6P54276 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.35■□□□□ 0.85
Msh6P54276 Chchd1-203ENSMUST00000224633 557 ntBASIC20.35■□□□□ 0.85
Msh6P54276 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Msh6P54276 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Msh6P54276 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.35■□□□□ 0.85
Msh6P54276 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.35■□□□□ 0.85
Msh6P54276 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh6P54276 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms